Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Gbem_1339 | Gbem_3867 | Gbem_1339 | Gbem_3867 | Peptidylprolyl cis-trans isomerase, cyclophilin-type; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | C1 family peptidase domain protein. | 0.611 |
Gbem_1339 | Gbem_3871 | Gbem_1339 | Gbem_3871 | Peptidylprolyl cis-trans isomerase, cyclophilin-type; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | Phosphatidylethanolamine-binding protein. | 0.775 |
Gbem_1339 | gltA-1 | Gbem_1339 | Gbem_1652 | Peptidylprolyl cis-trans isomerase, cyclophilin-type; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | Citrate synthase; Belongs to the citrate synthase family. | 0.608 |
Gbem_1339 | gltA-2 | Gbem_1339 | Gbem_3905 | Peptidylprolyl cis-trans isomerase, cyclophilin-type; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | Citrate synthase; Belongs to the citrate synthase family. | 0.608 |
Gbem_1339 | rpsK | Gbem_1339 | Gbem_0958 | Peptidylprolyl cis-trans isomerase, cyclophilin-type; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | Ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. | 0.544 |
Gbem_2559 | Gbem_3867 | Gbem_2559 | Gbem_3867 | ATPase, AAA family. | C1 family peptidase domain protein. | 0.685 |
Gbem_2559 | Gbem_4007 | Gbem_2559 | Gbem_4007 | ATPase, AAA family. | Multicopper oxidase. | 0.512 |
Gbem_3866 | Gbem_3867 | Gbem_3866 | Gbem_3867 | Hypothetical protein. | C1 family peptidase domain protein. | 0.565 |
Gbem_3867 | Gbem_1339 | Gbem_3867 | Gbem_1339 | C1 family peptidase domain protein. | Peptidylprolyl cis-trans isomerase, cyclophilin-type; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | 0.611 |
Gbem_3867 | Gbem_2559 | Gbem_3867 | Gbem_2559 | C1 family peptidase domain protein. | ATPase, AAA family. | 0.685 |
Gbem_3867 | Gbem_3866 | Gbem_3867 | Gbem_3866 | C1 family peptidase domain protein. | Hypothetical protein. | 0.565 |
Gbem_3867 | Gbem_3871 | Gbem_3867 | Gbem_3871 | C1 family peptidase domain protein. | Phosphatidylethanolamine-binding protein. | 0.652 |
Gbem_3867 | Gbem_4007 | Gbem_3867 | Gbem_4007 | C1 family peptidase domain protein. | Multicopper oxidase. | 0.557 |
Gbem_3867 | can | Gbem_3867 | Gbem_3868 | C1 family peptidase domain protein. | Carbonic anhydrase, beta-family, clade B. | 0.526 |
Gbem_3867 | gltA-1 | Gbem_3867 | Gbem_1652 | C1 family peptidase domain protein. | Citrate synthase; Belongs to the citrate synthase family. | 0.580 |
Gbem_3867 | gltA-2 | Gbem_3867 | Gbem_3905 | C1 family peptidase domain protein. | Citrate synthase; Belongs to the citrate synthase family. | 0.580 |
Gbem_3867 | ppiA | Gbem_3867 | Gbem_3965 | C1 family peptidase domain protein. | Cytosolic peptidylprolyl cis-trans isomerase, cyclophilin A-like protein; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | 0.611 |
Gbem_3867 | rpsK | Gbem_3867 | Gbem_0958 | C1 family peptidase domain protein. | Ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. | 0.608 |
Gbem_3871 | Gbem_1339 | Gbem_3871 | Gbem_1339 | Phosphatidylethanolamine-binding protein. | Peptidylprolyl cis-trans isomerase, cyclophilin-type; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | 0.775 |
Gbem_3871 | Gbem_3867 | Gbem_3871 | Gbem_3867 | Phosphatidylethanolamine-binding protein. | C1 family peptidase domain protein. | 0.652 |
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