STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
top6ADNA topoisomerase (ATP-hydrolyzing); Relaxes both positive and negative superturns and exhibits a strong decatenase activity; Belongs to the TOP6A family. (367 aa)    
Predicted Functional Partners:
top6B
DNA topoisomerase VI, B subunit; Relaxes both positive and negative superturns and exhibits a strong decatenase activity.
 
 
 0.995
ABS26854.1
KEGG: ade:Adeh_3964 RecA protein.
  
 
 0.686
recA
recA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.
    
 0.617
recA-2
recA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.
    
 0.617
ABS26969.1
KEGG: ade:Adeh_2838 hypothetical protein.
       0.576
htpX-2
PFAM: peptidase M48 Ste24p; KEGG: ade:Adeh_2841 peptidase M48, Ste24p; Belongs to the peptidase M48B family.
       0.530
ABS24274.1
PFAM: glycosyl transferase group 1; KEGG: ade:Adeh_4095 glycosyl transferase, group 1.
  
 
   0.487
ABS26172.1
TIGRFAM: HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase; PFAM: HAD superfamily (subfamily IG) hydrolase 5'-Nucleotidase; KEGG: ade:Adeh_1870 HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase.
 
 
 
 0.479
ABS26346.1
KEGG: reh:H16_B0196 DNA repair exonuclease, SbcC.
    
 0.464
ABS26710.1
KEGG: ade:Adeh_1259 hypothetical protein.
    
 0.464
Your Current Organism:
Anaeromyxobacter sp. Fw1095
NCBI taxonomy Id: 404589
Other names: A. sp. Fw109-5, Anaeromyxobacter sp. Fw109-5
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