Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ureA | ureA-2 | SACE_0634 | SACE_2527 | Urease gamma subunit protein; Belongs to the urease gamma subunit family. | Urease beta/gamma subunit. | 0.987 |
ureA | ureA-3 | SACE_0634 | SACE_3484 | Urease gamma subunit protein; Belongs to the urease gamma subunit family. | Urease beta/gamma subunit. | 0.988 |
ureA | ureB | SACE_0634 | SACE_0635 | Urease gamma subunit protein; Belongs to the urease gamma subunit family. | Urease beta subunit; Belongs to the urease beta subunit family. | 0.999 |
ureA | ureC | SACE_0634 | SACE_0636 | Urease gamma subunit protein; Belongs to the urease gamma subunit family. | Urease alpha subunit. | 0.999 |
ureA | ureC-2 | SACE_0634 | SACE_2526 | Urease gamma subunit protein; Belongs to the urease gamma subunit family. | Urease alpha subunit. | 0.999 |
ureA | ureC-3 | SACE_0634 | SACE_3485 | Urease gamma subunit protein; Belongs to the urease gamma subunit family. | Urease alpha subunit. | 0.997 |
ureA | ureD | SACE_0634 | SACE_0639 | Urease gamma subunit protein; Belongs to the urease gamma subunit family. | Putative urease accessory protein; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter. | 0.888 |
ureA | ureF | SACE_0634 | SACE_0637 | Urease gamma subunit protein; Belongs to the urease gamma subunit family. | Putative urease accessory protein. | 0.908 |
ureA | ureG | SACE_0634 | SACE_0638 | Urease gamma subunit protein; Belongs to the urease gamma subunit family. | Urease accessory protein; Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG. | 0.963 |
ureA | ureG-2 | SACE_0634 | SACE_2524 | Urease gamma subunit protein; Belongs to the urease gamma subunit family. | Urease accessory protein; Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG. | 0.906 |
ureA-2 | ureA | SACE_2527 | SACE_0634 | Urease beta/gamma subunit. | Urease gamma subunit protein; Belongs to the urease gamma subunit family. | 0.987 |
ureA-2 | ureA-3 | SACE_2527 | SACE_3484 | Urease beta/gamma subunit. | Urease beta/gamma subunit. | 0.999 |
ureA-2 | ureB | SACE_2527 | SACE_0635 | Urease beta/gamma subunit. | Urease beta subunit; Belongs to the urease beta subunit family. | 0.988 |
ureA-2 | ureC | SACE_2527 | SACE_0636 | Urease beta/gamma subunit. | Urease alpha subunit. | 0.999 |
ureA-2 | ureC-2 | SACE_2527 | SACE_2526 | Urease beta/gamma subunit. | Urease alpha subunit. | 0.999 |
ureA-2 | ureC-3 | SACE_2527 | SACE_3485 | Urease beta/gamma subunit. | Urease alpha subunit. | 0.999 |
ureA-2 | ureD | SACE_2527 | SACE_0639 | Urease beta/gamma subunit. | Putative urease accessory protein; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter. | 0.939 |
ureA-2 | ureF | SACE_2527 | SACE_0637 | Urease beta/gamma subunit. | Putative urease accessory protein. | 0.934 |
ureA-2 | ureG | SACE_2527 | SACE_0638 | Urease beta/gamma subunit. | Urease accessory protein; Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG. | 0.961 |
ureA-2 | ureG-2 | SACE_2527 | SACE_2524 | Urease beta/gamma subunit. | Urease accessory protein; Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG. | 0.988 |
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