Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SACE_1533 | aceE | SACE_1533 | SACE_1532 | Hypothetical protein. | Pyruvate dehydrogenase E1 component; Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). | 0.487 |
SACE_1533 | ahpE | SACE_1533 | SACE_1534 | Hypothetical protein. | Member of AhpC/TSA family. | 0.676 |
SACE_1533 | rpsA | SACE_1533 | SACE_5431 | Hypothetical protein. | 30S ribosomal protein S1. | 0.545 |
aceE | SACE_1533 | SACE_1532 | SACE_1533 | Pyruvate dehydrogenase E1 component; Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). | Hypothetical protein. | 0.487 |
aceE | ahpE | SACE_1532 | SACE_1534 | Pyruvate dehydrogenase E1 component; Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). | Member of AhpC/TSA family. | 0.567 |
ahpE | SACE_1533 | SACE_1534 | SACE_1533 | Member of AhpC/TSA family. | Hypothetical protein. | 0.676 |
ahpE | aceE | SACE_1534 | SACE_1532 | Member of AhpC/TSA family. | Pyruvate dehydrogenase E1 component; Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). | 0.567 |
ahpE | bcpB | SACE_1534 | SACE_1887 | Member of AhpC/TSA family. | Bacterioferritin comigratory protein. | 0.429 |
ahpE | lgt | SACE_1534 | SACE_5746 | Member of AhpC/TSA family. | Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family. | 0.449 |
ahpE | rpsA | SACE_1534 | SACE_5431 | Member of AhpC/TSA family. | 30S ribosomal protein S1. | 0.408 |
ahpE | trpC | SACE_1534 | SACE_5750 | Member of AhpC/TSA family. | Indole-3-glycerol-phosphate synthase; Belongs to the TrpC family. | 0.600 |
bcpB | ahpE | SACE_1887 | SACE_1534 | Bacterioferritin comigratory protein. | Member of AhpC/TSA family. | 0.429 |
lgt | ahpE | SACE_5746 | SACE_1534 | Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family. | Member of AhpC/TSA family. | 0.449 |
lgt | trpC | SACE_5746 | SACE_5750 | Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family. | Indole-3-glycerol-phosphate synthase; Belongs to the TrpC family. | 0.718 |
rpsA | SACE_1533 | SACE_5431 | SACE_1533 | 30S ribosomal protein S1. | Hypothetical protein. | 0.545 |
rpsA | ahpE | SACE_5431 | SACE_1534 | 30S ribosomal protein S1. | Member of AhpC/TSA family. | 0.408 |
trpC | ahpE | SACE_5750 | SACE_1534 | Indole-3-glycerol-phosphate synthase; Belongs to the TrpC family. | Member of AhpC/TSA family. | 0.600 |
trpC | lgt | SACE_5750 | SACE_5746 | Indole-3-glycerol-phosphate synthase; Belongs to the TrpC family. | Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family. | 0.718 |