Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SACE_1340 | SACE_2203 | SACE_1340 | SACE_2203 | DsbA oxidoreductase. | Hypothetical protein. | 0.463 |
SACE_1340 | SACE_2204 | SACE_1340 | SACE_2204 | DsbA oxidoreductase. | Phosphatidylinositol 3-and 4-kinase, catalytic. | 0.494 |
SACE_1340 | SACE_3497 | SACE_1340 | SACE_3497 | DsbA oxidoreductase. | Probable transcriptional regulator, MarR family. | 0.516 |
SACE_1340 | SACE_7179 | SACE_1340 | SACE_7179 | DsbA oxidoreductase. | Hypothetical protein. | 0.759 |
SACE_1340 | cysS2 | SACE_1340 | SACE_2226 | DsbA oxidoreductase. | cysteinyl-tRNA synthetase; Catalyzes the ATP-dependent condensation of GlcN-Ins and L- cysteine to form L-Cys-GlcN-Ins; Belongs to the class-I aminoacyl-tRNA synthetase family. MshC subfamily. | 0.684 |
SACE_1340 | mshA | SACE_1340 | SACE_6971 | DsbA oxidoreductase. | Glycosyl transferase; Catalyzes the transfer of a N-acetyl-glucosamine moiety to 1D-myo-inositol 3-phosphate to produce 1D-myo-inositol 2-acetamido-2- deoxy-glucopyranoside 3-phosphate in the mycothiol biosynthesis pathway. | 0.612 |
SACE_1340 | mshB2 | SACE_1340 | SACE_1543 | DsbA oxidoreductase. | Putative N-acetylglucosaminylphosphatidylinositol deacetylase; Catalyzes the deacetylation of 1D-myo-inositol 2-acetamido-2- deoxy-alpha-D-glucopyranoside (GlcNAc-Ins) in the mycothiol biosynthesis pathway. | 0.756 |
SACE_1340 | mshD | SACE_1340 | SACE_7100 | DsbA oxidoreductase. | Acetyltransferase; Catalyzes the transfer of acetyl from acetyl-CoA to desacetylmycothiol (Cys-GlcN-Ins) to form mycothiol. | 0.789 |
SACE_1541 | SACE_1542 | SACE_1541 | SACE_1542 | Twin-arginine translocation pathway signal. | Hypothetical protein; Metal-dependent hydrolase. | 0.773 |
SACE_1541 | mshB2 | SACE_1541 | SACE_1543 | Twin-arginine translocation pathway signal. | Putative N-acetylglucosaminylphosphatidylinositol deacetylase; Catalyzes the deacetylation of 1D-myo-inositol 2-acetamido-2- deoxy-alpha-D-glucopyranoside (GlcNAc-Ins) in the mycothiol biosynthesis pathway. | 0.524 |
SACE_1542 | SACE_1541 | SACE_1542 | SACE_1541 | Hypothetical protein; Metal-dependent hydrolase. | Twin-arginine translocation pathway signal. | 0.773 |
SACE_1542 | mshB2 | SACE_1542 | SACE_1543 | Hypothetical protein; Metal-dependent hydrolase. | Putative N-acetylglucosaminylphosphatidylinositol deacetylase; Catalyzes the deacetylation of 1D-myo-inositol 2-acetamido-2- deoxy-alpha-D-glucopyranoside (GlcNAc-Ins) in the mycothiol biosynthesis pathway. | 0.533 |
SACE_2203 | SACE_1340 | SACE_2203 | SACE_1340 | Hypothetical protein. | DsbA oxidoreductase. | 0.463 |
SACE_2203 | SACE_2204 | SACE_2203 | SACE_2204 | Hypothetical protein. | Phosphatidylinositol 3-and 4-kinase, catalytic. | 0.970 |
SACE_2203 | cysS2 | SACE_2203 | SACE_2226 | Hypothetical protein. | cysteinyl-tRNA synthetase; Catalyzes the ATP-dependent condensation of GlcN-Ins and L- cysteine to form L-Cys-GlcN-Ins; Belongs to the class-I aminoacyl-tRNA synthetase family. MshC subfamily. | 0.465 |
SACE_2203 | mshA | SACE_2203 | SACE_6971 | Hypothetical protein. | Glycosyl transferase; Catalyzes the transfer of a N-acetyl-glucosamine moiety to 1D-myo-inositol 3-phosphate to produce 1D-myo-inositol 2-acetamido-2- deoxy-glucopyranoside 3-phosphate in the mycothiol biosynthesis pathway. | 0.405 |
SACE_2203 | mshB2 | SACE_2203 | SACE_1543 | Hypothetical protein. | Putative N-acetylglucosaminylphosphatidylinositol deacetylase; Catalyzes the deacetylation of 1D-myo-inositol 2-acetamido-2- deoxy-alpha-D-glucopyranoside (GlcNAc-Ins) in the mycothiol biosynthesis pathway. | 0.565 |
SACE_2203 | mshD | SACE_2203 | SACE_7100 | Hypothetical protein. | Acetyltransferase; Catalyzes the transfer of acetyl from acetyl-CoA to desacetylmycothiol (Cys-GlcN-Ins) to form mycothiol. | 0.461 |
SACE_2204 | SACE_1340 | SACE_2204 | SACE_1340 | Phosphatidylinositol 3-and 4-kinase, catalytic. | DsbA oxidoreductase. | 0.494 |
SACE_2204 | SACE_2203 | SACE_2204 | SACE_2203 | Phosphatidylinositol 3-and 4-kinase, catalytic. | Hypothetical protein. | 0.970 |
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