STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
echA6enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. (226 aa)    
Predicted Functional Partners:
SACE_3490
Sensor histidine kinase/response regulator.
   
 
 0.776
echA14
enoyl-CoA hydratase/isomerase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
     0.773
echA12
Putative enoyl-CoA hydratase/isomerase family protein; Belongs to the enoyl-CoA hydratase/isomerase family.
  
     0.773
SACE_3745
enoyl-CoA hydratase/carnithine racemase.
  
     0.773
SACE_3989
enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
     0.773
SACE_4016
Carbon monoxide dehydrogenase subunit G.
       0.773
SACE_2794
enoyl-CoA hydratase/isomerase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
     0.771
SACE_4572
Polyketide biosynthesis enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
     0.768
SACE_4017
Carbon-monoxide dehydrogenase.
       0.671
SACE_4018
Carbon monoxide dehydrogenase small chain.
       0.671
Your Current Organism:
Saccharopolyspora erythraea
NCBI taxonomy Id: 405948
Other names: S. erythraea NRRL 2338, Saccharopolyspora erythraea ATCC 11635, Saccharopolyspora erythraea DSM 40517, Saccharopolyspora erythraea JCM 4748, Saccharopolyspora erythraea NRRL 2338, Saccharopolyspora erythraea str. NRRL 2338, Saccharopolyspora erythraea strain NRRL 2338
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