Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
SACE_1923 | SACE_2191 | Hypothetical protein. | Possible transcriptional regulator, TetR family. | 0.417 |
SACE_1923 | SACE_4278 | Hypothetical protein. | Oxygenase (secreted protein). | 0.641 |
SACE_1923 | SACE_6222 | Hypothetical protein. | Secreted protein. | 0.569 |
SACE_1923 | SACE_6254 | Hypothetical protein. | Hypothetical protein. | 0.587 |
SACE_2130 | SACE_6222 | Hypothetical protein. | Secreted protein. | 0.426 |
SACE_2191 | SACE_1923 | Possible transcriptional regulator, TetR family. | Hypothetical protein. | 0.417 |
SACE_2191 | SACE_6222 | Possible transcriptional regulator, TetR family. | Secreted protein. | 0.427 |
SACE_4278 | SACE_1923 | Oxygenase (secreted protein). | Hypothetical protein. | 0.641 |
SACE_4278 | SACE_6055 | Oxygenase (secreted protein). | Probable conserved integral membrane protein. | 0.545 |
SACE_4278 | SACE_6222 | Oxygenase (secreted protein). | Secreted protein. | 0.451 |
SACE_5443 | SACE_6222 | Hypothetical protein. | Secreted protein. | 0.425 |
SACE_5672 | SACE_6222 | Hypothetical protein. | Secreted protein. | 0.438 |
SACE_5672 | SACE_7252 | Hypothetical protein. | Protein of unknown function DUF214. | 0.435 |
SACE_6055 | SACE_4278 | Probable conserved integral membrane protein. | Oxygenase (secreted protein). | 0.545 |
SACE_6055 | SACE_6222 | Probable conserved integral membrane protein. | Secreted protein. | 0.643 |
SACE_6055 | SACE_7252 | Probable conserved integral membrane protein. | Protein of unknown function DUF214. | 0.417 |
SACE_6221 | SACE_6222 | MarR-transcriptional regulator. | Secreted protein. | 0.413 |
SACE_6222 | SACE_1923 | Secreted protein. | Hypothetical protein. | 0.569 |
SACE_6222 | SACE_2130 | Secreted protein. | Hypothetical protein. | 0.426 |
SACE_6222 | SACE_2191 | Secreted protein. | Possible transcriptional regulator, TetR family. | 0.427 |
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