STRINGSTRING
fbp protein (Xenorhabdus nematophila) - STRING interaction network
"fbp" - annotation not available in Xenorhabdus nematophila
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fbpannotation not available (334 aa)    
Predicted Functional Partners:
fbaA
Fructose-bisphosphate aldolase, class II; Evidence 7 - Gene remnant; Product type ph - phenotype (358 aa)
   
 
  0.957
pgi
annotation not available (548 aa)
   
 
  0.956
tktA
Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate (664 aa)
   
 
  0.948
pfkA
ATP-dependent 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis (325 aa)
   
  0.946
fruK
annotation not available (312 aa)
   
 
  0.945
talB
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway (317 aa)
   
 
  0.930
lsrF
3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase; Involved in the degradation of phospho-AI-2, thereby terminating induction of the lsr operon and closing the AI-2 signaling cycle. Catalyzes the transfer of an acetyl moiety from 3-hydroxy-5-phosphonooxypentane-2,4-dione to CoA to form glycerone phosphate and acetyl-CoA; Belongs to the DeoC/FbaB aldolase family (294 aa)
       
  0.914
fbaB
annotation not available (349 aa)
       
  0.914
manA
annotation not available (390 aa)
     
 
  0.903
mak
annotation not available (301 aa)
     
 
    0.900
Your Current Organism:
Xenorhabdus nematophila
NCBI taxonomy Id: 406817
Other names: X. nematophila ATCC 19061, Xenorhabdus nematophila, Xenorhabdus nematophila ATCC 19061, Xenorhabdus nematophila ATCC19061, Xenorhabdus nematophila str. ATCC 19061, Xenorhabdus nematophila strain ATCC 19061
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