STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XNC1_2524Conserved hypothetical protein (probable component of SST VI); Homologs of previously reported genes of unknown function. (348 aa)    
Predicted Functional Partners:
XNC1_2525
Conserved hypothetical protein (probable component of SST VI cluster); Homologs of previously reported genes of unknown function.
 
  
 0.971
XNC1_2527
Putative Type VI secretion system effector (Hcp1 family); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor.
 
  
 0.961
XNC1_2522
Conserved hypothetical protein with OmpA/MotB domains (probable component of SST VI cluster); Homologs of previously reported genes of unknown function.
 
  
 0.959
XNC1_2531
Conserved hypothetical protein (probable component of SST VI cluster); Homologs of previously reported genes of unknown function.
 
  
 0.953
XNC1_2526
Conserved hypothetical protein (probable component of SST VI cluster); Homologs of previously reported genes of unknown function.
 
  
 0.940
XNC1_2523
Conserved hypothetical protein (IcmF-like domain protein of SST VI cluster); Homologs of previously reported genes of unknown function.
 
  
 0.937
XNC1_2521
Conserved hypothetical protein, probable component of SST VI cluster; Homologs of previously reported genes of unknown function.
 
  
 0.928
XNC1_2520
Conserved Hypothetical protein (putative lipoprotein of SST VI cluster); Homologs of previously reported genes of unknown function.
 
  
 0.919
XNC1_2515
Conserved hypothetical protein (Vgr family protein, that may be secreted via SST VI system); Homologs of previously reported genes of unknown function.
 
  
 0.908
XNC1_2529
Conserved hypothetical protein (probable component of SST VI cluster); Homologs of previously reported genes of unknown function.
 
  
 0.883
Your Current Organism:
Xenorhabdus nematophila
NCBI taxonomy Id: 406817
Other names: X. nematophila ATCC 19061, Xenorhabdus nematophila ATCC 19061, Xenorhabdus nematophila str. ATCC 19061, Xenorhabdus nematophila strain ATCC 19061
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.