STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mdtBMultidrug transport protein (RND family); Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. MdtB subfamily. (1056 aa)    
Predicted Functional Partners:
mdtA
Membrane protein inolved in drug resistance; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.974
mdtC
Multidrug transport protein, outer membrane (RND family); Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. MdtC subfamily.
 
    
0.801
baeS
Sensory histidine kinase in two-component regulatory system wtih BaeR.
  
    0.787
baeR
Response regulator in two-component regulatory system with BaeS (OmpR family).
     
 0.781
acrA
Component of acridine efflux pump; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.685
XBJ1_1099
Putative transport transmembrane protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative carrier; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.653
Your Current Organism:
Xenorhabdus bovienii
NCBI taxonomy Id: 406818
Other names: X. bovienii SS-2004, Xenorhabdus bovienii SS-2004, Xenorhabdus bovienii str. SS-2004, Xenorhabdus bovienii strain SS-2004
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.