STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
X975_23271Lysine-specific demethylase 3A. (1264 aa)    
Predicted Functional Partners:
X975_09504
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1.
    
 0.776
X975_14426
Transcription activator BRG1.
    
 0.760
X975_25181
SWI/SNF complex subunit SMARCC2.
   
 
 0.743
X975_14140
SWIB domain-containing protein.
     
 0.733
X975_16309
Zinc finger protein DPF3.
     
 0.733
X975_27084
Lysine-specific demethylase 2B.
   
 
 0.719
X975_27085
Lysine-specific demethylase 2A.
   
 
 0.719
X975_12829
Trithorax group protein osa.
   
 0.685
X975_10685
Trithorax group protein osa.
   
 0.685
X975_16333
cAMP-dependent protein kinase catalytic subunit alpha; Belongs to the protein kinase superfamily.
   
 
 0.673
Your Current Organism:
Stegodyphus mimosarum
NCBI taxonomy Id: 407821
Other names: S. mimosarum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.