STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
X975_14534E3 ubiquitin ligase RNF4. (204 aa)    
Predicted Functional Partners:
X975_26377
Ubiquitin-conjugating enzyme E2 N; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.962
X975_07985
Ubiquitin-conjugating enzyme E2 N; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.962
X975_15309
NFATC2-interacting protein.
   
 
 0.960
X975_16292
Ubiquitin-60S ribosomal protein L40.
    
  0.958
X975_07808
Polyubiquitin-C.
    
  0.953
X975_18159
Ubiquitin-conjugating enzyme E2 variant 2.
    
 0.921
X975_07348
KxDL motif-containing protein 1.
    
   0.921
X975_03382
Tropomyosin; Belongs to the tropomyosin family.
    
   0.871
X975_00575
Tropomyosin.
    
   0.871
X975_24787
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.779
Your Current Organism:
Stegodyphus mimosarum
NCBI taxonomy Id: 407821
Other names: S. mimosarum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.