• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Solyc00g007260.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc00g007260.2.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc00g007260.2.1annotation not available (460 aa)    
Predicted Functional Partners:
101261004
annotation not available (522 aa)
     
 
  0.723
101254525
annotation not available (515 aa)
     
 
  0.723
101253058
annotation not available (99 aa)
     
 
  0.711
101263848
Uncharacterized protein; Small ubiquitinrelated modifier 5 (91 aa)
     
 
  0.711
sumo
Small ubiquitin-related modifier; SUMO protein (105 aa)
     
 
  0.711
101266843
annotation not available (99 aa)
     
 
  0.711
Solyc07g049360.2.1
annotation not available (96 aa)
     
 
  0.711
101267748
Uncharacterized protein; SUMO-activating enzyme 2 (650 aa)
     
 
  0.683
101256382
DNA repair-recombination protein (RAD50) (1316 aa)
     
      0.642
101255831
Uncharacterized protein; Structural maintenance of chromosomes 5 (1050 aa)
     
 
  0.633
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
Server load: low (8%) [HD]