STRINGSTRING
Solyc00g007260.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc00g007260.2.1" - Annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc00g007260.2.1Annotation not available (460 aa)    
Predicted Functional Partners:
Solyc12g006010.1.1
Uncharacterized protein (99 aa)
       
  0.917
Solyc09g091890.2.1
Uncharacterized protein (91 aa)
       
  0.917
sumo
SUMO protein (105 aa)
       
  0.917
Solyc07g064880.2.1
Small ubiquitin-related modifier (99 aa)
       
  0.917
Solyc07g049360.2.1
Uncharacterized protein (96 aa)
       
  0.917
Solyc12g099530.1.1
Uncharacterized protein (522 aa)
     
 
  0.808
Solyc01g066830.2.1
Uncharacterized protein (515 aa)
     
 
  0.808
Solyc06g010100.1.1
Uncharacterized protein (855 aa)
     
 
  0.760
Solyc11g069160.1.1
Uncharacterized protein (877 aa)
     
 
  0.739
Solyc08g008130.2.1
Uncharacterized protein (883 aa)
     
 
  0.739
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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