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  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Solyc00g007300.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc00g007300.2.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc00g007300.2.1annotation not available (567 aa)    
Predicted Functional Partners:
101250908
annotation not available (662 aa)
       
 
  0.664
Solyc03g118640.2.1
Uncharacterized protein; Ketose-bisphosphate aldolase class-II family protein (1343 aa)
           
  0.595
101260694
annotation not available (121 aa)
           
  0.591
Solyc02g089460.1.1
annotation not available (101 aa)
           
  0.591
Solyc12g056980.1.1
annotation not available (307 aa)
           
  0.573
DREB3
Dehydration-responsive element binding protein 3 (264 aa)
           
  0.573
Solyc07g062940.2.1
annotation not available (716 aa)
     
 
  0.459
Solyc01g108850.2.1
annotation not available (455 aa)
   
      0.449
101255884
annotation not available (1738 aa)
     
   
  0.441
Solyc04g007650.2.1
annotation not available (1654 aa)
     
   
  0.441
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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