STRINGSTRING
Solyc00g011870.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc00g011870.1.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc00g011870.1.1annotation not available (122 aa)    
Predicted Functional Partners:
101265334
Protein serine/threonine phosphatases;protein kinases;catalytics;cAMP-dependent protein kinase regulators;ATP binding;protein serine/threonine phosphatases (1080 aa)
     
 
  0.673
Solyc06g065920.2.1
Protein phosphatase 2C family protein (374 aa)
     
 
  0.642
Solyc01g056690.2.1
Protein kinase family protein / protein phosphatase 2C ( PP2C) family protein (653 aa)
     
 
  0.564
Solyc03g007270.2.1
Protein phosphatase 2C family protein (298 aa)
           
  0.557
101253764
annotation not available (293 aa)
     
   
  0.511
101267244
annotation not available (581 aa)
     
 
  0.474
Solyc05g045950.1.1
annotation not available (178 aa)
     
 
  0.474
101259540
ARM repeat superfamily protein (587 aa)
     
 
  0.474
Solyc04g007100.2.1
annotation not available (525 aa)
     
 
  0.474
101256968
Protein phosphatase 2C family protein (353 aa)
           
  0.461
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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