STRINGSTRING
Solyc00g015720.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc00g015720.1.1" - Protein of unknown function in Solanum lycopersicum
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc00g015720.1.1Protein of unknown function (DUF604) (520 aa)    
Predicted Functional Partners:
101257645
PEBP (phosphatidylethanolamine-binding protein) family protein (173 aa)
           
  0.626
101265334
Protein serine/threonine phosphatases;protein kinases;catalytics;cAMP-dependent protein kinase regulators;ATP binding;protein serine/threonine phosphatases (1080 aa)
     
        0.625
101262769
Chaperone DnaJ-domain superfamily protein (300 aa)
     
        0.577
101261069
annotation not available (152 aa)
           
  0.562
Solyc03g005510.1.1
annotation not available (175 aa)
           
  0.562
Solyc02g092320.2.1
annotation not available (271 aa)
           
  0.549
Solyc02g092310.2.1
annotation not available (594 aa)
           
  0.549
Solyc09g055570.2.1
Leucine-rich repeat protein kinase family protein (930 aa)
     
        0.541
101264867
DNA helicase; Minichromosome maintenance (MCM2/3/5) family protein; Belongs to the MCM family (831 aa)
     
        0.516
101265675
Non-specific lipid-transfer protein; Plant non-specific lipid-transfer proteins transfer phospholipids as well as galactolipids across membranes. May play a role in wax or cutin deposition in the cell walls of expanding epidermal cells and certain secretory tissues (121 aa)
           
  0.497
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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