STRINGSTRING
Solyc00g017920.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc00g017920.1.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc00g017920.1.1annotation not available (356 aa)    
Predicted Functional Partners:
101264854
annotation not available (683 aa)
   
 
  0.946
101253805
annotation not available (482 aa)
   
 
  0.946
101254111
Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family (401 aa)
   
 
  0.946
101250846
annotation not available (312 aa)
   
   
  0.941
101253902
annotation not available (257 aa)
   
   
  0.941
Solyc04g011510.2.1
Uncharacterized protein; Triosephosphate isomerase (259 aa)
   
   
  0.941
101246286
annotation not available (326 aa)
   
   
  0.941
101262594
Glucose-6-phosphate isomerase ; Belongs to the GPI family (568 aa)
   
   
  0.932
543945
Glucose-6-phosphate isomerase ; Belongs to the GPI family (617 aa)
   
   
  0.932
Solyc11g007690.1.1
annotation not available (490 aa)
   
   
  0.814
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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