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STRINGSTRING
Solyc00g017930.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc00g017930.1.1" - annotation not available in Solanum lycopersicum
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
Solyc00g017930.1.1annotation not available (250 aa)    
Predicted Functional Partners:
101267921
Uncharacterized protein; Acetyl Co-enzyme a carboxylase biotin carboxylase subunit (536 aa)
 
 
  0.967
LOC543993
Biotin carboxyl carrier protein of acetyl-CoA carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA (734 aa)
 
 
  0.963
Solyc07g021380.1.1
annotation not available (121 aa)
     
   
  0.937
3950421
Chloroplast envelope membrane protein; May be involved in proton extrusion. Indirectly promotes efficient inorganic carbon uptake into chloroplasts (229 aa)
     
   
  0.928
ndhJ
NAD(P)H-quinone oxidoreductase subunit J, chloroplastic; NDH shuttles electrons from NAD(P)H-plastoquinone, via FMN and iron-sulfur (Fe-S) centers, to quinones in the photosynthetic chain and possibly in a chloroplast respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient; Belongs to the complex I 30 kDa subunit family (158 aa)
   
   
  0.921
3950406
Photosystem I reaction center subunit VIII; May help in the organization of the PsaL subunit (72 aa)
     
   
  0.906
Solyc09g065790.1.1
annotation not available (176 aa)
     
   
  0.905
101254327
annotation not available (358 aa)
   
   
  0.904
Solyc02g011760.1.1
Uncharacterized protein; Iron-sulfur cluster binding;electron carriers;4 iron, 4 sulfur cluster binding (94 aa)
     
   
  0.897
3950409
Photosystem II CP47 reaction center protein; One of the components of the core complex of photosystem II (PSII). It binds chlorophyll and helps catalyze the primary light-induced photochemical processes of PSII. PSII is a light- driven water-plastoquinone oxidoreductase, using light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation; Belongs to the PsbB/PsbC family. PsbB subfamily (553 aa)
     
   
  0.882
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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