STRINGSTRING
Solyc00g017930.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc00g017930.1.1" - Annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc00g017930.1.1Annotation not available (250 aa)    
Predicted Functional Partners:
Solyc12g056940.1.1
Uncharacterized protein (2210 aa)
   
  0.990
Solyc09g013080.2.1
Uncharacterized protein (761 aa)
 
  0.984
Solyc01g094340.2.1
Uncharacterized protein (725 aa)
 
  0.984
Solyc01g008330.2.1
Uncharacterized protein (536 aa)
 
  0.981
BCCP1
Biotin carboxylase carrier protein (285 aa)
 
 
  0.830
Solyc06g069530.2.1
Uncharacterized protein (261 aa)
 
 
  0.829
Solyc01g006980.2.1
Uncharacterized protein (359 aa)
   
 
  0.678
Solyc10g085550.1.1
Enolase (444 aa)
       
 
  0.621
Solyc10g045050.1.1
Uncharacterized protein (107 aa)
       
 
  0.621
PGH1
Enolase (444 aa)
       
 
  0.621
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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