STRINGSTRING
Solyc00g023020.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc00g023020.1.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc00g023020.1.1annotation not available (176 aa)    
Predicted Functional Partners:
101246417
Uncharacterized protein; Phosphoribosylformylglycinamidine cyclo-ligase, chloroplast / phosphoribosyl-aminoimidazole synthetase / AIR synthase (PUR5) (404 aa)
   
  0.996
IMPCHase
Uncharacterized protein; Putative inosine monophosphate cyclohydrolase (600 aa)
 
 
  0.981
101265372
Uncharacterized protein; Glycinamide ribonucleotide (GAR) synthetase (514 aa)
   
 
  0.962
101256508
Uncharacterized protein; GMP synthase (glutamine-hydrolyzing), putative / glutamine amidotransferase, putative (536 aa)
 
   
  0.939
101252648
Uncharacterized protein; Formyl transferase (305 aa)
   
 
  0.935
Solyc08g078490.2.1
annotation not available (333 aa)
   
 
  0.935
101251299
annotation not available (323 aa)
   
 
  0.935
Solyc02g076720.2.1
annotation not available (1459 aa)
   
 
  0.920
Solyc01g107270.2.1
annotation not available (1333 aa)
   
 
  0.920
ureD
Putative urease accessory protein D (297 aa)
   
 
  0.913
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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