STRINGSTRING
Solyc00g025530.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc00g025530.1.1" - Annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc00g025530.1.1Annotation not available (260 aa)    
Predicted Functional Partners:
Solyc03g118640.2.1
Uncharacterized protein (1343 aa)
         
  0.749
Solyc08g022210.2.1
Translation initiation factor eIF-2B subunit alpha/beta/delta-like protein ; Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P) (374 aa)
   
 
  0.658
Solyc11g042950.1.1
Uncharacterized protein (92 aa)
       
  0.631
Solyc11g042940.1.1
Uncharacterized protein (298 aa)
       
  0.631
Solyc04g077040.2.1
Uncharacterized protein (559 aa)
       
  0.631
Solyc04g077030.2.1
Uncharacterized protein (575 aa)
       
  0.631
Solyc00g104630.1.1
Annotation not available (270 aa)
       
  0.631
Solyc07g006780.2.1
Uncharacterized protein (621 aa)
   
 
  0.592
Solyc10g007050.2.1
Uncharacterized protein (364 aa)
       
  0.568
Solyc07g063040.2.1
Probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 (508 aa)
       
  0.568
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
Server load: low (16%) [HD]