STRINGSTRING
Solyc00g030210.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc00g030210.1.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc00g030210.1.1annotation not available (1147 aa)    
Predicted Functional Partners:
101254692
annotation not available (497 aa)
 
   
  0.763
101055537
Hop-interacting protein THI138 (771 aa)
   
   
  0.651
101259915
annotation not available (552 aa)
       
  0.644
Solyc01g106880.2.1
Uncharacterized protein; Methyltransferases (340 aa)
   
   
  0.637
101253076
annotation not available (517 aa)
   
   
  0.622
101246236
Elongator complex protein 3; Catalytic histone acetyltransferase subunit of the RNA polymerase II elongator complex, which is a component of the RNA polymerase II (Pol II) holoenzyme and is involved in transcriptional elongation (565 aa)
           
  0.619
Solyc02g063180.2.1
annotation not available (141 aa)
         
  0.618
Solyc12g096330.1.1
Uncharacterized protein; Methyltransferases (96 aa)
         
  0.617
101256464
Uncharacterized protein; Peptidyl-tRNA hydrolase II (PTH2) family protein (200 aa)
           
  0.607
Solyc09g047870.2.1
Uncharacterized protein; Bacterial hemolysin-related (287 aa)
   
   
  0.601
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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