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STRINGSTRING
Solyc00g030520.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc00g030520.2.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc00g030520.2.1annotation not available (241 aa)    
Predicted Functional Partners:
101258352
Uncharacterized protein; S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (288 aa)
   
   
  0.912
101251249
GTP-binding family protein (645 aa)
   
 
  0.780
Solyc10g005910.2.1
Uncharacterized protein; GTP binding;GTP binding (710 aa)
   
 
  0.780
101246529
Uncharacterized protein; tRNA modification GTPase, putative; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin- like GTPase superfamily. TrmE GTPase family (560 aa)
   
 
  0.780
Solyc03g005740.1.1
annotation not available (80 aa)
     
      0.574
101266453
Uncharacterized protein; transferases;tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferases (484 aa)
   
 
  0.569
PRO2
Delta-1-pyrroline-5-carboxylate synthase; P5CS plays a key role in proline biosynthesis, leading to osmoregulation in plants; In the C-terminal section; belongs to the gamma- glutamyl phosphate reductase family (720 aa)
           
  0.548
101244293
Delta-1-pyrroline-5-carboxylate synthase; P5CS plays a key role in proline biosynthesis, leading to osmoregulation in plants; In the N-terminal section; belongs to the glutamate 5- kinase family (717 aa)
           
  0.548
Solyc11g069690.1.1
Uncharacterized protein; PDI-like 5-1 (125 aa)
     
 
  0.532
101264854
annotation not available (683 aa)
         
  0.493
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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