STRINGSTRING
Solyc00g031050.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc00g031050.1.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc00g031050.1.1annotation not available (460 aa)    
Predicted Functional Partners:
101248498
Uncharacterized protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- ubiquinone biosynthetic process; LOCATED IN- mitochondrion; EXPRESSED IN- 24 plant structures; EXPRESSED DURING- 15 growth stages; CONTAINS InterPro DOMAIN/s- COQ9 (InterPro-IPR013718), Ubiquino /.../synthesis protein COQ9 (InterPro-IPR012762); Has 35333 Blast hits to 34131 proteins in 2444 species- Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source- NCBI BLink) (309 aa)
           
  0.595
Solyc03g080020.2.1
annotation not available (203 aa)
           
  0.572
101245288
Uncharacterized protein; NAD(P)-binding Rossmann-fold superfamily protein (401 aa)
     
   
  0.569
Solyc05g051630.2.1
Uncharacterized protein; Lipid transporters (550 aa)
           
  0.520
101244223
Uncharacterized protein; Transducin/WD40 repeat-like superfamily protein (925 aa)
           
  0.516
101248066
Uncharacterized protein; P-loop containing nucleoside triphosphate hydrolases superfamily protein (304 aa)
           
  0.513
101261672
annotation not available (405 aa)
           
  0.513
101246321
annotation not available (402 aa)
           
  0.513
101264454
Major facilitator superfamily protein (433 aa)
           
  0.452
101257392
Major facilitator superfamily protein (460 aa)
           
  0.428
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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