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  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Solyc00g032030.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc00g032030.1.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc00g032030.1.1annotation not available (148 aa)    
Predicted Functional Partners:
101251046
annotation not available (146 aa)
       
      0.534
Suv
annotation not available (160 aa)
       
      0.534
101253818
annotation not available (146 aa)
       
      0.534
101251279
annotation not available (635 aa)
           
  0.474
Solyc09g008940.2.1
annotation not available (417 aa)
           
  0.465
Solyc03g123860.2.1
annotation not available (1104 aa)
       
 
  0.457
101250874
Ribosomal L18p/L5e family protein (162 aa)
       
      0.408
Solyc11g069080.1.1
Ribosomal L18p/L5e family protein (64 aa)
       
      0.408
101266480
Uncharacterized protein; Ubiquitin-specific protease 24; Belongs to the peptidase C19 family (534 aa)
       
      0.408
101246751
Uncharacterized protein; Ubiquitin-specific protease 5; Belongs to the peptidase C19 family (937 aa)
       
      0.408
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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