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STRINGSTRING
Solyc00g042140.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc00g042140.1.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc00g042140.1.1annotation not available (399 aa)    
Predicted Functional Partners:
Solyc00g042130.1.1
annotation not available (704 aa)
 
 
0.999
atpB
ATP synthase subunit beta, chloroplastic; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family (609 aa)
 
 
0.998
101248453
ATP synthase subunit d, mitochondrial; Mitochondrial membrane ATP synthase (F(1)F(0) ATP synthase or Complex V) produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain. F-type ATPases consist of two structural domains, F(1) - containing the extramembraneous catalytic core, and F(0) - containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the cent [...] (168 aa)
     
 
  0.996
Solyc06g005020.1.1
annotation not available (143 aa)
     
 
  0.996
Solyc06g005010.1.1
annotation not available (86 aa)
     
 
  0.996
101254882
Uncharacterized protein; ATP synthase delta-subunit gene (250 aa)
   
 
  0.996
Solyc05g050500.1.1
ATPase, F1 complex, OSCP/delta subunit protein (241 aa)
   
 
  0.996
101244808
Uncharacterized protein; Delta subunit of Mt ATP synthase (239 aa)
   
 
  0.996
Solyc02g012010.1.1
annotation not available (101 aa)
 
 
  0.995
Solyc11g051170.1.1
annotation not available (91 aa)
 
 
  0.995
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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