STRINGSTRING
Solyc00g052430.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc00g052430.2.1" - Annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc00g052430.2.1Annotation not available (379 aa)    
Predicted Functional Partners:
Solyc00g019950.1.1
Annotation not available (190 aa)
     
   
  0.574
Solyc12g039010.1.1
Cytochrome c oxidase subunit 2 ; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. Subunit 2 transfers the electrons from cytochrome c via its binuclear copper A center to the bimetallic center of the catalytic subunit 1 (538 aa)
     
   
  0.550
Solyc11g056410.1.1
Uncharacterized protein (234 aa)
     
   
  0.547
Solyc09g015870.2.1
Uncharacterized protein (131 aa)
     
   
  0.547
Solyc10g061990.1.1
Uncharacterized protein (191 aa)
     
   
  0.547
Solyc00g049210.1.1
Annotation not available (589 aa)
     
 
  0.540
Solyc00g021630.1.1
Annotation not available (217 aa)
     
   
  0.527
Solyc11g056270.1.1
Uncharacterized protein (527 aa)
     
   
  0.522
Solyc09g056070.1.1
Uncharacterized protein (395 aa)
     
   
  0.522
Solyc11g030570.1.1
Uncharacterized protein (63 aa)
     
   
  0.511
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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