STRINGSTRING
Solyc00g053440.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc00g053440.2.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc00g053440.2.1annotation not available (156 aa)    
Predicted Functional Partners:
101265334
Protein serine/threonine phosphatases;protein kinases;catalytics;cAMP-dependent protein kinase regulators;ATP binding;protein serine/threonine phosphatases (1080 aa)
   
   
  0.857
Solyc05g050530.2.1
Uncharacterized protein; Pyridoxamine 5’-phosphate oxidase family protein (207 aa)
     
        0.713
101252901
Heat shock protein 70 (Hsp 70) family protein (890 aa)
     
 
  0.578
101264972
Uncharacterized protein; FORKED 1 (487 aa)
           
  0.577
Solyc04g010120.2.1
LisH/CRA/RING-U-box domains-containing protein (425 aa)
     
   
  0.569
Solyc03g078020.2.1
Uncharacterized protein; Peptide chain release factor 1 (283 aa)
         
  0.569
DAD1
Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1; Essential subunit of the N-oligosaccharyl transferase (OST) complex which catalyzes the transfer of a high mannose oligosaccharide from a lipid-linked oligosaccharide donor to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains. Possesses cell death-inhibiting activity (116 aa)
     
   
  0.569
NR
Nitrate reductase [NADH]; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria (912 aa)
     
   
  0.556
101251832
Integral membrane TerC family protein (357 aa)
         
  0.545
101259023
Unknown protein; CONTAINS InterPro DOMAIN/s- Protein of unknown function DUF2042 (InterPro-IPR018611); Has 559 Blast hits to 533 proteins in 154 species- Archae - 3; Bacteria - 32; Metazoa - 305; Fungi - 42; Plants - 50; Viruses - 3; Other Eukaryote /.../4 (source- NCBI BLink) (816 aa)
           
  0.522
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
Server load: low (19%) [HD]