STRINGSTRING
Solyc00g065630.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc00g065630.1.1" - Annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc00g065630.1.1Annotation not available (529 aa)    
Predicted Functional Partners:
cdc5
CDC5-like protein (987 aa)
     
  0.982
Solyc09g090660.2.1
Uncharacterized protein (521 aa)
     
  0.981
Solyc09g010620.1.1
Uncharacterized protein (163 aa)
     
  0.979
Solyc01g094480.2.1
Uncharacterized protein (482 aa)
     
  0.979
Solyc02g078970.2.1
Uncharacterized protein (570 aa)
     
  0.977
Solyc09g010190.2.1
Peptidyl-prolyl cis-trans isomerase ; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides (164 aa)
     
  0.975
Solyc07g039550.2.1
Uncharacterized protein (1190 aa)
     
  0.971
Solyc01g110990.2.1
Uncharacterized protein (1111 aa)
     
  0.971
Solyc03g117940.2.1
Uncharacterized protein (286 aa)
       
  0.970
Solyc05g051070.2.1
Uncharacterized protein (310 aa)
     
  0.970
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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