STRINGSTRING
Solyc00g072400.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc00g072400.2.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc00g072400.2.1annotation not available (319 aa)    
Predicted Functional Partners:
101249763
annotation not available (549 aa)
     
 
    0.652
Solyc02g070070.1.1
annotation not available (531 aa)
     
 
    0.652
Solyc12g055820.1.1
annotation not available (527 aa)
         
    0.650
Eli3
Uncharacterized protein; ELI3 (359 aa)
         
    0.650
101259903
annotation not available (356 aa)
         
    0.650
104644298
annotation not available (359 aa)
         
    0.650
101265396
annotation not available (359 aa)
         
    0.650
101253340
annotation not available (359 aa)
         
    0.650
Solyc08g014360.1.1
annotation not available (380 aa)
         
    0.650
101254908
annotation not available (538 aa)
         
    0.650
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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