STRINGSTRING
Solyc00g074810.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc00g074810.1.1" - Annotation not available in Solanum lycopersicum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc00g074810.1.1Annotation not available (369 aa)    
Predicted Functional Partners:
Solyc00g060700.1.1
Annotation not available (812 aa)
 
     
  0.673
Solyc00g060710.1.1
Annotation not available (137 aa)
 
     
  0.665
Solyc00g050030.1.1
Annotation not available (702 aa)
         
  0.579
Solyc02g081910.1.1
DNA topoisomerase ; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5’-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3’-OH DNA strand (1175 aa)
         
  0.528
Solyc12g062630.1.1
Uncharacterized protein (134 aa)
         
  0.489
Solyc00g030210.1.1
Annotation not available (1147 aa)
         
  0.477
Solyc07g018360.2.1
Elongation factor Ts ; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome (1048 aa)
              0.457
Solyc00g074820.1.1
Annotation not available (308 aa)
   
          0.452
Solyc10g038080.1.1
Uncharacterized protein (514 aa)
         
  0.434
LOC543548
Dehydroquinate dehydratase/shikimate-NADP oxidoreductase (545 aa)
         
  0.434
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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