STRINGSTRING
Solyc00g074810.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc00g074810.1.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc00g074810.1.1annotation not available (369 aa)    
Predicted Functional Partners:
Solyc00g134820.1.1
annotation not available (249 aa)
   
   
  0.671
Solyc00g167290.1.1
annotation not available (230 aa)
     
 
  0.670
Solyc00g060710.1.1
annotation not available (137 aa)
 
   
  0.667
Solyc12g038370.1.1
Nucleic acid-binding, OB-fold-like protein (229 aa)
         
  0.614
Solyc01g100080.2.1
Uncharacterized protein; Mitochondrially targeted single-stranded DNA binding protein (208 aa)
         
  0.614
Solyc03g121120.2.1
Uncharacterized protein; ATP-dependent peptidases;nucleotide binding;serine-type endopeptidases;DNA helicases;ATP binding;damaged DNA binding;nucleoside-triphosphatases (588 aa)
   
   
  0.607
Solyc00g009060.2.1
Hypoxanthine-guanine phosphoribosyltransferase (199 aa)
         
  0.578
101250934
annotation not available (577 aa)
           
  0.551
101266758
annotation not available (551 aa)
           
  0.551
101251377
annotation not available (564 aa)
         
  0.536
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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