STRINGSTRING
Solyc00g090110.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc00g090110.1.1" - Annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc00g090110.1.1Annotation not available (305 aa)    
Predicted Functional Partners:
Solyc03g098140.2.1
Uncharacterized protein (343 aa)
 
     
  0.821
Solyc03g031560.2.1
Uncharacterized protein (318 aa)
 
 
  0.819
Solyc12g008790.1.1
Uncharacterized protein (269 aa)
 
   
  0.817
Solyc00g030210.1.1
Annotation not available (1147 aa)
   
   
  0.789
Solyc07g049740.2.1
Uncharacterized protein (452 aa)
 
     
  0.746
Solyc10g083710.1.1
Uncharacterized protein (426 aa)
 
     
  0.745
Solyc10g006980.2.1
Uncharacterized protein (296 aa)
 
     
  0.737
Solyc07g064710.2.1
Uncharacterized protein (398 aa)
 
     
  0.736
kdsA
3-desoxy-D-manno octulosonic acid-8-phosphate synthase (290 aa)
 
     
  0.735
Solyc02g044050.1.1
Uncharacterized protein (491 aa)
   
   
  0.704
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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