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Solyc00g093100.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc00g093100.1.1" - MATE efflux family protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc00g093100.1.1MATE efflux family protein (195 aa)    
Predicted Functional Partners:
Solyc08g082350.2.1
annotation not available (411 aa)
           
  0.627
101257695
Uncharacterized protein; Embryo defective 1379 (312 aa)
           
  0.624
HO2
Heme oxygenase 2 (368 aa)
           
  0.556
Solyc02g086780.2.1
Uncharacterized protein; CONTAINS InterPro DOMAIN/s- Proteasome assembly chaperone 3 (InterPro-IPR018788); Has 120 Blast hits to 120 proteins in 47 species- Archae - 0; Bacteria - 0; Metazoa - 62; Fungi - 2; Plants - 49; Viruses - 0; Other Eukaryotes - 7 (source- NCBI BLink) (80 aa)
           
  0.541
Solyc05g005460.2.1
DC1 domain-containing protein (581 aa)
           
  0.534
101253139
Uncharacterized protein; Calmodulin-related (319 aa)
           
  0.530
Solyc07g064240.2.1
Early nodulin-like protein 9 (218 aa)
           
  0.518
Solyc01g080070.2.1
annotation not available (425 aa)
           
  0.518
101261383
Uncharacterized protein; GCR2-like 1 (424 aa)
           
  0.485
Solyc02g088930.2.1
Unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biological_process unknown; LOCATED IN- mitochondrion; EXPRESSED IN- 24 plant structures; EXPRESSED DURING- 16 growth stages; Has 42 Blast hits to 42 proteins in 17 species- Arc /.../0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 1 (source- NCBI BLink) (138 aa)
           
  0.449
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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