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  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Solyc00g101700.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc00g101700.1.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc00g101700.1.1annotation not available (162 aa)    
Predicted Functional Partners:
101265334
Protein serine/threonine phosphatases;protein kinases;catalytics;cAMP-dependent protein kinase regulators;ATP binding;protein serine/threonine phosphatases (1080 aa)
       
 
  0.926
Solyc11g016990.1.1
annotation not available (365 aa)
       
 
  0.726
Solyc06g065480.2.1
annotation not available (261 aa)
       
 
  0.726
Solyc01g008310.2.1
tRNA synthetase beta subunit family protein (576 aa)
     
        0.689
MAPK16
Mitogen-activated protein kinase 16 (575 aa)
     
 
  0.658
mpka1;1
Mitogen-activated protein kinase 1 (396 aa)
     
 
  0.658
MAPK4
Mitogen-activated protein kinase 4 (372 aa)
     
 
  0.658
MAPK10
Mitogen-activated protein kinase 10 (593 aa)
     
 
  0.658
MAPK7
Mitogen-activated protein kinase 7 (379 aa)
     
 
  0.658
MPK2
Mitogen-activated protein kinase 2 (394 aa)
     
 
  0.658
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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