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STRINGSTRING
Solyc00g127550.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc00g127550.1.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc00g127550.1.1annotation not available (149 aa)    
Predicted Functional Partners:
101261156
Uncharacterized protein; Ribonucleotide reductase 2A (340 aa)
   
 
  0.988
101268630
Uncharacterized protein; Ferritin/ribonucleotide reductase-like family protein (329 aa)
   
 
  0.988
101267455
Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism (527 aa)
   
   
  0.971
101264867
DNA helicase; Minichromosome maintenance (MCM2/3/5) family protein; Belongs to the MCM family (831 aa)
     
 
  0.952
101258564
annotation not available (532 aa)
     
   
  0.945
101055576
DNA polymerase alpha catalytic subunit (1561 aa)
     
 
  0.943
pcna
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (264 aa)
     
   
  0.941
101258292
DNA primases;DNA primases; Belongs to the eukaryotic-type primase small subunit family (454 aa)
     
   
  0.941
101243636
DNA helicase; Minichromosome maintenance (MCM2/3/5) family protein; Belongs to the MCM family (718 aa)
     
 
  0.939
101259745
DNA polymerase alpha subunit B; May play an essential role at the early stage of chromosomal DNA replication by coupling the polymerase alpha/primase complex to the cellular replication machinery (617 aa)
     
   
  0.938
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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