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STRINGSTRING
Solyc00g164680.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc00g164680.1.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc00g164680.1.1annotation not available (490 aa)    
Predicted Functional Partners:
LOC543970
Chorimate mutase (255 aa)
         
  0.565
100316881
Uncharacterized protein; Starch synthase IV (1001 aa)
           
  0.461
101244954
Uncharacterized protein; Glycosylphosphatidylinositol-anchored lipid protein transfer 1 (186 aa)
     
   
  0.447
Solyc08g067260.2.1
3-ketoacyl-CoA synthase 10 (506 aa)
     
        0.420
101244154
ABC-2 type transporter family protein (688 aa)
     
 
0.406
101268837
annotation not available (682 aa)
     
 
0.405
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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