STRINGSTRING
Solyc00g164680.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc00g164680.1.1" - Annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc00g164680.1.1Annotation not available (490 aa)    
Predicted Functional Partners:
Solyc10g049480.1.1
Uncharacterized protein (461 aa)
   
  0.735
Solyc11g069820.1.1
Uncharacterized protein (1093 aa)
   
  0.692
Solyc11g018690.1.1
Uncharacterized protein (342 aa)
   
  0.692
Solyc09g008000.2.1
Uncharacterized protein (1091 aa)
   
  0.692
Solyc07g065780.1.1
Uncharacterized protein (445 aa)
   
  0.692
Solyc07g065770.2.1
Uncharacterized protein (226 aa)
   
  0.692
Solyc06g075020.2.1
Uncharacterized protein (1094 aa)
   
  0.692
Solyc05g051540.1.1
Uncharacterized protein (130 aa)
   
  0.692
Solyc04g070970.2.1
Uncharacterized protein (722 aa)
   
  0.692
Solyc04g025180.2.1
Uncharacterized protein (115 aa)
   
  0.692
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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