STRINGSTRING
Solyc00g185750.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc00g185750.1.1" - annotation not available in Solanum lycopersicum
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc00g185750.1.1annotation not available (392 aa)    
Predicted Functional Partners:
Solyc01g097140.2.1
Uncharacterized protein; Rhodanese/Cell cycle control phosphatase superfamily protein (132 aa)
     
 
  0.530
101262055
Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes (229 aa)
     
 
  0.514
HY5
Transcription factor HY5; Transcription factor that promotes photomorphogenesis in the light and positively regulates fruit pigmentation and fruit nutritional quality. Probably acts downstream of the light receptor network and directly affects transcription of light- induced genes (158 aa)
     
 
  0.499
101265334
Protein serine/threonine phosphatases;protein kinases;catalytics;cAMP-dependent protein kinase regulators;ATP binding;protein serine/threonine phosphatases (1080 aa)
     
 
  0.481
MAPK16
Mitogen-activated protein kinase 16 (575 aa)
       
 
  0.473
mpka1;1
Mitogen-activated protein kinase 1 (396 aa)
       
 
  0.473
MAPK4
Mitogen-activated protein kinase 4 (372 aa)
       
 
  0.473
MAPK10
Mitogen-activated protein kinase 10 (593 aa)
       
 
  0.473
MAPK7
Mitogen-activated protein kinase 7 (379 aa)
       
 
  0.473
MPK2
Mitogen-activated protein kinase 2 (394 aa)
       
 
  0.473
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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