STRINGSTRING
Solyc00g245200.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc00g245200.1.1" - Annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc00g245200.1.1Annotation not available (61 aa)    
Predicted Functional Partners:
Solyc09g015340.1.1
Uncharacterized protein (206 aa)
   
          0.526
Solyc01g017310.1.1
Uncharacterized protein (74 aa)
   
          0.526
Solyc09g018800.1.1
Uncharacterized protein (95 aa)
   
          0.525
Solyc09g015300.1.1
Uncharacterized protein (118 aa)
   
          0.525
Solyc09g015320.1.1
Uncharacterized protein (230 aa)
   
          0.524
Solyc06g009940.1.1
Uncharacterized protein (72 aa)
   
          0.522
Solyc12g032960.1.1
Uncharacterized protein (84 aa)
   
          0.518
Solyc09g015290.1.1
Uncharacterized protein (80 aa)
   
          0.517
Solyc12g032990.1.1
Uncharacterized protein (181 aa)
   
          0.513
Solyc06g009950.1.1
Uncharacterized protein (56 aa)
   
          0.513
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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