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STRINGSTRING
Solyc00g277510.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc00g277510.1.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc00g277510.1.1annotation not available (66 aa)    
Predicted Functional Partners:
3950409
Photosystem II CP47 reaction center protein; One of the components of the core complex of photosystem II (PSII). It binds chlorophyll and helps catalyze the primary light-induced photochemical processes of PSII. PSII is a light- driven water-plastoquinone oxidoreductase, using light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation; Belongs to the PsbB/PsbC family. PsbB subfamily (553 aa)
   
 
  0.976
3950413
Cytochrome b559 subunit beta; This b-type cytochrome is tightly associated with the reaction center of photosystem II (PSII). PSII is a light-driven water-plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation; Belongs to the PsbE/PsbF family (39 aa)
     
 
  0.942
3950376
Photosystem II reaction center protein I; One of the components of the core complex of photosystem II (PSII), required for its stability and/or assembly. PSII is a light-driven water-plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation (77 aa)
     
 
  0.939
Solyc10g045230.1.1
Photosystem II reaction center protein E (99 aa)
     
 
  0.933
Solyc05g021190.1.1
annotation not available (89 aa)
   
 
  0.927
Solyc00g230080.1.1
annotation not available (118 aa)
   
 
  0.927
Solyc11g050770.1.1
Photosystem II reaction center protein Z; Controls the interaction of photosystem II (PSII) cores with the light-harvesting antenna (81 aa)
     
 
  0.923
3950428
Photosystem II reaction center protein Z; Controls the interaction of photosystem II (PSII) cores with the light-harvesting antenna (62 aa)
     
 
  0.923
Solyc09g031730.1.1
annotation not available (81 aa)
   
 
  0.921
Solyc08g065370.1.1
annotation not available (83 aa)
   
 
  0.920
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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