STRINGSTRING
Solyc00g286020.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc00g286020.1.1" - Annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc00g286020.1.1Annotation not available (312 aa)    
Predicted Functional Partners:
Solyc00g286010.1.1
Annotation not available (122 aa)
 
 
  0.770
Solyc00g104200.1.1
Annotation not available (402 aa)
 
 
  0.679
Solyc00g286030.1.1
Annotation not available (195 aa)
 
          0.532
Solyc00g042140.1.1
Annotation not available (399 aa)
              0.521
Solyc00g042130.1.1
Annotation not available (704 aa)
              0.521
Solyc10g083960.1.1
Uncharacterized protein (498 aa)
   
 
  0.506
Solyc09g008310.2.1
Uncharacterized protein (513 aa)
   
 
  0.506
Solyc01g087500.2.1
DNA topoisomerase 2 ; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1478 aa)
         
  0.499
Solyc03g113860.1.1
Uncharacterized protein (288 aa)
         
  0.491
Solyc00g026870.1.1
Annotation not available (465 aa)
         
  0.478
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
Server load: low (12%) [HD]