STRINGSTRING
Solyc01g005090.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc01g005090.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc01g005090.2.1Uncharacterized protein (349 aa)    
Predicted Functional Partners:
Solyc09g090660.2.1
Uncharacterized protein (521 aa)
       
      0.805
Solyc00g007010.2.1
Annotation not available (582 aa)
 
 
  0.649
Solyc02g082750.2.1
Uncharacterized protein (594 aa)
 
 
  0.647
ER43
Ethylene-responsive small GTP-binding protein (216 aa)
       
      0.645
Solyc10g086350.1.1
Uncharacterized protein (216 aa)
       
      0.645
Solyc09g010370.2.1
Uncharacterized protein (216 aa)
       
      0.645
Solyc06g005350.2.1
Uncharacterized protein (144 aa)
       
      0.645
ypt2
GTP-binding protein (216 aa)
       
      0.645
Solyc10g076590.1.1
Uncharacterized protein (363 aa)
 
 
  0.635
Solyc10g076580.1.1
Uncharacterized protein (190 aa)
     
  0.635
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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