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Solyc01g005090.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc01g005090.2.1" - DNAse I-like superfamily protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc01g005090.2.1DNAse I-like superfamily protein (349 aa)    
Predicted Functional Partners:
101244542
ARABIDOPSIS TRITHORAX-RELATED PROTEIN 5 (388 aa)
     
   
  0.775
101263464
annotation not available (521 aa)
       
      0.640
101258977
Uncharacterized protein; Inositol 1,3,4-trisphosphate 5/6-kinase 4 (508 aa)
           
  0.599
ER43
Ethylene-responsive small GTP-binding protein (216 aa)
     
 
  0.593
101264577
annotation not available (216 aa)
     
 
  0.593
101267153
annotation not available (216 aa)
     
 
  0.593
Solyc06g005350.2.1
annotation not available (144 aa)
     
 
  0.593
ypt2
GTP-binding protein (216 aa)
     
 
  0.593
101253363
Inositol polyphosphate multikinase; Inositol phosphate kinase with a broad substrate specificity (367 aa)
     
   
  0.571
101262540
Inositol-tetrakisphosphate 1-kinase; Kinase that can phosphorylate various inositol polyphosphate such as Ins(3,4,5,6)P4 or Ins(1,3,4)P3; Belongs to the ITPK1 family (349 aa)
           
  0.569
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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