STRINGSTRING
Solyc01g005440.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc01g005440.2.1" - Jasmonate ZIM-domain protein 3 in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc01g005440.2.1Jasmonate ZIM-domain protein 3 (309 aa)    
Predicted Functional Partners:
Coi1
Coronatine-insensitive 1 (603 aa)
       
  0.993
JA3
Transcription factor MYC2 (689 aa)
     
  0.985
Solyc12g009220.1.1
Jasmonate ZIM-domain protein 1 (252 aa)
     
 
0.956
Solyc08g036660.2.1
Uncharacterized protein (127 aa)
       
 
  0.935
Solyc08g036640.2.1
Uncharacterized protein (112 aa)
       
 
  0.935
Solyc08g036620.2.1
Uncharacterized protein (103 aa)
       
 
  0.935
Solyc07g042170.2.1
Uncharacterized protein (216 aa)
     
 
  0.909
Solyc05g050560.1.1
Uncharacterized protein (579 aa)
     
 
  0.629
Solyc01g096050.2.1
Uncharacterized protein (605 aa)
     
 
  0.629
Solyc06g071680.2.1
Histone deacetylase (471 aa)
       
      0.596
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
Server load: low (18%) [HD]