STRINGSTRING
Solyc01g006110.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc01g006110.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc01g006110.2.1Uncharacterized protein (405 aa)    
Predicted Functional Partners:
Solyc07g065020.2.1
Serine/threonine-protein phosphatase (305 aa)
       
 
  0.971
PP2Ac1
Serine/threonine-protein phosphatase (306 aa)
     
 
  0.956
Solyc01g073650.2.1
Serine/threonine-protein phosphatase (312 aa)
     
 
  0.956
Solyc01g034020.2.1
Serine/threonine-protein phosphatase (306 aa)
     
 
  0.956
PP2Ac2
Serine/threonine-protein phosphatase (306 aa)
     
 
  0.956
Solyc01g005950.2.1
Serine/threonine-protein phosphatase (313 aa)
     
 
  0.956
Solyc10g049850.1.1
Uncharacterized protein (312 aa)
       
 
  0.946
Solyc01g107420.2.1
Uncharacterized protein (104 aa)
       
 
  0.946
Solyc12g006100.1.1
Serine/threonine-protein phosphatase (886 aa)
       
 
  0.904
Solyc11g071920.1.1
Serine/threonine-protein phosphatase (995 aa)
       
 
  0.904
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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