STRINGSTRING
104646356 protein (Solanum lycopersicum) - STRING interaction network
"104646356" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
104646356annotation not available (496 aa)    
Predicted Functional Partners:
101252712
HXXXD-type acyl-transferase family protein (460 aa)
           
  0.773
101252981
Uncharacterized protein; CW7 (389 aa)
           
  0.772
101267071
Uncharacterized protein; Cyclin family (495 aa)
           
  0.772
101265334
Protein serine/threonine phosphatases;protein kinases;catalytics;cAMP-dependent protein kinase regulators;ATP binding;protein serine/threonine phosphatases (1080 aa)
     
        0.625
Solyc11g069100.1.1
annotation not available (170 aa)
           
  0.613
Solyc10g054920.1.1
annotation not available (104 aa)
           
  0.613
AGO1B
Uncharacterized protein; Argonaute 1 ; Belongs to the argonaute family (980 aa)
           
  0.613
Solyc03g078590.1.1
annotation not available (85 aa)
           
  0.613
101255985
DNAse I-like superfamily protein (558 aa)
     
   
  0.597
101267938
Uncharacterized protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biological_process unknown; LOCATED IN- mitochondrion; CONTAINS InterPro DOMAIN/s- Metal-dependent phosphohydrolase, HD subdomain (InterPro-IPR006674), Ppx/GppA phosphatase (InterPro-IPR003695); /.../0201 Blast hits to 17322 proteins in 780 species- Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source- NCBI BLink) (563 aa)
           
  0.581
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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