STRINGSTRING
Solyc01g007160.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc01g007160.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc01g007160.2.1Uncharacterized protein (357 aa)    
Predicted Functional Partners:
Solyc06g073780.2.1
SMC3 (1229 aa)
     
  0.974
pcna
Proliferating cell nuclear antigen ; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (264 aa)
     
  0.963
Solyc05g014370.2.1
Uncharacterized protein (208 aa)
     
 
  0.920
Solyc11g012770.1.1
Uncharacterized protein (1659 aa)
     
  0.903
Solyc06g068430.2.1
Uncharacterized protein (725 aa)
     
  0.902
Solyc06g068060.2.1
Uncharacterized protein (846 aa)
     
  0.902
Solyc06g065710.2.1
Uncharacterized protein (940 aa)
     
  0.902
Solyc06g060380.2.1
Uncharacterized protein (1447 aa)
     
  0.902
Solyc03g117010.2.1
Uncharacterized protein (997 aa)
     
  0.902
Solyc03g116970.1.1
Uncharacterized protein (428 aa)
     
  0.902
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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