STRINGSTRING
101261441 protein (Solanum lycopersicum) - STRING interaction network
"101261441" - annotation not available in Solanum lycopersicum
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101261441annotation not available (293 aa)    
Predicted Functional Partners:
101249976
Alpha-L RNA-binding motif/Ribosomal protein S4 family protein (182 aa)
     
 
  0.993
101250547
annotation not available (553 aa)
     
 
  0.992
101261490
annotation not available (314 aa)
     
 
  0.991
Solyc02g069770.2.1
annotation not available (516 aa)
     
 
  0.991
Solyc03g120080.2.1
Periodic tryptophan protein 2 (666 aa)
     
 
  0.991
Solyc05g010480.2.1
Transducin family protein / WD-40 repeat family protein (396 aa)
     
 
  0.991
101258943
RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)- acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires a tRNA-binding adapter protein for full tRNA acetyltransferase activity but not for 18S rRNA acetylation (1030 aa)
     
 
  0.991
Solyc10g080180.1.1
Uncharacterized protein; Transducin/WD40 repeat-like superfamily protein (499 aa)
     
 
  0.991
101254131
Transducin family protein / WD-40 repeat family protein (907 aa)
     
 
  0.991
101257911
Uncharacterized protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- RNA processing; LOCATED IN- intracellular; EXPRESSED IN- 22 plant structures; EXPRESSED DURING- 13 growth stages; CONTAINS InterPro DOMAIN/s- RNA-processing protein, HAT helix (InterPro-IPR00310 /.../ small nucleolar RNA-associated protein 6 (InterPro-IPR013949); Has 492 Blast hits to 480 proteins in 206 species- Archae - 0; Bacteria - 2; Metazoa - 128; Fungi - 191; Plants - 60; Viruses - 0; Other Eukaryotes - 111 (source- NCBI BLink) (652 aa)
     
 
  0.991
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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