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petA protein (Solanum lycopersicum) - STRING interaction network
"petA" - Apocytochrome f in Solanum lycopersicum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
petAApocytochrome f ; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions (320 aa)    
Predicted Functional Partners:
petG
Cytochrome b6-f complex subunit 5 ; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions. PetG is required for either the stability or assembly of the cytochrome b6-f complex (46 aa)
       
  0.997
Solyc01g017740.1.1
Uncharacterized protein (97 aa)
     
  0.991
Solyc12g005630.1.1
Cytochrome b6-f complex iron-sulfur subunit (231 aa)
     
  0.991
petD
Cytochrome b6-f complex subunit 4 ; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions (139 aa)
     
 
  0.984
petB
Cytochrome b6 ; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions (213 aa)
     
 
  0.977
Solyc07g032450.1.1
Uncharacterized protein (69 aa)
   
 
  0.964
Solyc11g039840.1.1
Cytochrome b-c1 complex subunit Rieske, mitochondrial ; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis (265 aa)
     
 
  0.951
Solyc11g056490.1.1
Uncharacterized protein (77 aa)
     
 
  0.946
Solyc09g050020.1.1
Uncharacterized protein (364 aa)
     
 
  0.946
Solyc05g014060.1.1
Uncharacterized protein (171 aa)
     
 
  0.946
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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