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3950384 protein (Solanum lycopersicum) - STRING interaction network
"3950384" - 50S ribosomal protein L14, chloroplastic in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
395038450S ribosomal protein L14, chloroplastic; Binds to 23S rRNA (122 aa)    
Predicted Functional Partners:
3950466
30S ribosomal protein S8, chloroplastic; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit (134 aa)
 
 
  0.999
3950385
50S ribosomal protein L16, chloroplastic ; Belongs to the universal ribosomal protein uL16 family (118 aa)
 
  0.993
Solyc11g021130.1.1
annotation not available (285 aa)
 
 
  0.992
Solyc04g049260.1.1
annotation not available (166 aa)
   
 
  0.988
DDTFR19
60S ribosomal protein L29; Ripening regulated protein DDTFR19 ; Belongs to the eukaryotic ribosomal protein eL29 family (60 aa)
     
 
  0.983
3950386
50S ribosomal protein L2, chloroplastic ; Belongs to the universal ribosomal protein uL2 family (352 aa)
 
 
  0.983
RPL3
Ribosomal protein L3 ; Belongs to the universal ribosomal protein uL3 family (389 aa)
   
 
  0.982
Solyc01g103510.2.1
R-protein L3 B; Belongs to the universal ribosomal protein uL3 family (443 aa)
   
 
  0.982
Solyc10g006910.1.1
annotation not available (76 aa)
   
 
  0.980
101262068
annotation not available (144 aa)
     
 
  0.979
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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