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rps3 protein (Solanum lycopersicum) - STRING interaction network
"rps3" - 30S ribosomal protein S3, chloroplastic in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rps330S ribosomal protein S3, chloroplastic (352 aa)    
Predicted Functional Partners:
rps19
30S ribosomal protein S19, chloroplastic ; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA (49 aa)
 
  0.999
Solyc11g021130.1.1
Ribosomal protein S7 (285 aa)
   
  0.999
rpl14
50S ribosomal protein L14, chloroplastic ; Binds to 23S rRNA (122 aa)
 
  0.999
Solyc02g077990.2.1
Uncharacterized protein (305 aa)
 
  0.999
Solyc10g006030.2.1
Uncharacterized protein (188 aa)
   
  0.999
Solyc01g096590.2.1
Uncharacterized protein (117 aa)
   
  0.999
Solyc01g096580.2.1
Uncharacterized protein (117 aa)
   
  0.999
Solyc05g005880.2.1
COSII_At5g14320 (168 aa)
 
  0.999
Solyc09g075430.2.1
Ribosomal protein L19 (218 aa)
   
  0.999
Solyc09g031760.1.1
Uncharacterized protein (120 aa)
   
  0.999
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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