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3950464 protein (Solanum lycopersicum) - STRING interaction network
"3950464" - 30S ribosomal protein S7, chloroplastic in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
395046430S ribosomal protein S7, chloroplastic; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit (155 aa)    
Predicted Functional Partners:
rps16
30S ribosomal protein S16 (132 aa)
   
 
  0.989
3950466
30S ribosomal protein S8, chloroplastic; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit (134 aa)
 
 
  0.983
DDTFR19
60S ribosomal protein L29; Ripening regulated protein DDTFR19 ; Belongs to the eukaryotic ribosomal protein eL29 family (60 aa)
     
 
  0.976
Solyc04g079790.2.1
Ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family (237 aa)
   
 
  0.969
101261490
annotation not available (314 aa)
     
      0.966
101268580
annotation not available (148 aa)
   
 
  0.966
101265118
annotation not available (148 aa)
   
 
  0.966
RPL3
Ribosomal protein L3 ; Belongs to the universal ribosomal protein uL3 family (389 aa)
   
 
  0.963
Solyc01g103510.2.1
R-protein L3 B; Belongs to the universal ribosomal protein uL3 family (443 aa)
   
 
  0.963
RPS25
40S ribosomal protein S25 ; Belongs to the eukaryotic ribosomal protein eS25 family (108 aa)
     
 
  0.962
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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