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STRINGSTRING
Solyc01g007780.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc01g007780.2.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc01g007780.2.1annotation not available (160 aa)    
Predicted Functional Partners:
Solyc10g011780.1.1
annotation not available (66 aa)
     
        0.690
101253491
Uncharacterized protein; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits (145 aa)
     
        0.690
101248917
Uncharacterized protein; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits (144 aa)
     
        0.690
101256619
annotation not available (167 aa)
     
      0.674
101262418
annotation not available (170 aa)
     
      0.674
Solyc05g054540.2.1
annotation not available (170 aa)
     
      0.674
101262710
annotation not available (165 aa)
     
      0.674
RanBP1
Ran binding protein-1 (224 aa)
     
        0.643
101255209
annotation not available (211 aa)
     
        0.643
101246934
annotation not available (450 aa)
     
        0.643
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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